Generalized Linear Mixed Models using Adaptive Gaussian Quadrature

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Documentation for package ‘GLMMadaptive’ version 0.9-1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

GLMMadaptive-package	Generalized Linear Mixed Models using Adaptive Gaussian Quadrature
anova	Various Methods for Standard Generics
anova.MixMod	Various Methods for Standard Generics
beta.binomial	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
beta.fam	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
censored.normal	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
coef	Various Methods for Standard Generics
coef.MixMod	Various Methods for Standard Generics
confint	Various Methods for Standard Generics
confint.MixMod	Various Methods for Standard Generics
cooks.distance	Various Methods for Standard Generics
cooks.distance.MixMod	Various Methods for Standard Generics
cr_marg_probs	Functions to Set-Up Data for a Continuation Ratio Mixed Model
cr_setup	Functions to Set-Up Data for a Continuation Ratio Mixed Model
effectPlotData	Predicted Values for Effects Plots
effectPlotData.MixMod	Predicted Values for Effects Plots
fitted	Various Methods for Standard Generics
fitted.MixMod	Various Methods for Standard Generics
fixef	Various Methods for Standard Generics
fixef.MixMod	Various Methods for Standard Generics
formula	Various Methods for Standard Generics
formula.MixMod	Various Methods for Standard Generics
Gamma.fam	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
GLMMadaptive	Generalized Linear Mixed Models using Adaptive Gaussian Quadrature
hurdle.beta.fam	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
hurdle.lognormal	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
hurdle.negative.binomial	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
hurdle.poisson	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
marginal_coefs	Marginal Coefficients from Generalized Linear Mixed Models
marginal_coefs.MixMod	Marginal Coefficients from Generalized Linear Mixed Models
methods.MixMod	Various Methods for Standard Generics
mixed_model	Generalized Linear Mixed Effects Models
model.frame	Various Methods for Standard Generics
model.frame.MixMod	Various Methods for Standard Generics
model.matrix	Various Methods for Standard Generics
model.matrix.MixMod	Various Methods for Standard Generics
negative.binomial	Family function for Negative Binomial Mixed Models
nobs	Various Methods for Standard Generics
nobs.MixMod	Various Methods for Standard Generics
predict	Various Methods for Standard Generics
predict.MixMod	Various Methods for Standard Generics
ranef	Various Methods for Standard Generics
ranef.MixMod	Various Methods for Standard Generics
residuals	Various Methods for Standard Generics
residuals.MixMod	Various Methods for Standard Generics
scoring_rules	Proper Scoring Rules for Categorical Data
simulate	Various Methods for Standard Generics
simulate.MixMod	Various Methods for Standard Generics
students.t	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
terms	Various Methods for Standard Generics
terms.MixMod	Various Methods for Standard Generics
unit.lindley	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
VIF	Various Methods for Standard Generics
VIF.MixMod	Various Methods for Standard Generics
zi.binomial	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
zi.negative.binomial	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models
zi.poisson	Family functions for Student's-t, Beta, Zero-Inflated and Hurdle Poisson and Negative Binomial, Hurdle Log-Normal, Hurdle Beta, Gamma, and Censored Normal Mixed Models