Bloom Filter Trie
|
Root vertex of a BFT. More...
Data Fields | |
char ** | filenames |
Inserted genome file names. More... | |
uint64_t * | hash_v |
uint16_t ** | skip_sp |
annotation_array_elem * | comp_set_colors |
info_per_level * | info_per_lvl |
annotation_inform * | ann_inf |
resultPresence * | res |
int | k |
Size of k-mers. More... | |
int | r1 |
int | r2 |
int | nb_genomes |
Number of genomes inserted. More... | |
int | length_comp_set_colors |
int | treshold_compression |
Color compression is triggered every BFT_Root::treshold_compression genome inserted. More... | |
uint8_t | compressed |
uint8_t | marked |
Node | node |
Root vertex of a BFT.
A BFT_Root contains the k-mer size as well as the number and name of the inserted genomes. Other contained structures and variables are for internal use only and must not be modified.
char** BFT_Root::filenames |
Inserted genome file names.
int BFT_Root::k |
Size of k-mers.
int BFT_Root::nb_genomes |
Number of genomes inserted.
It corresponds to the number of files stored in BFT_Root::filenames.
int BFT_Root::treshold_compression |
Color compression is triggered every BFT_Root::treshold_compression genome inserted.