Bloom Filter Trie
Data Fields
BFT_Root Struct Reference

Root vertex of a BFT. More...

Data Fields

char ** filenames
 Inserted genome file names. More...
 
uint64_t * hash_v
 
uint16_t ** skip_sp
 
annotation_array_elem * comp_set_colors
 
info_per_level * info_per_lvl
 
annotation_inform * ann_inf
 
resultPresence * res
 
int k
 Size of k-mers. More...
 
int r1
 
int r2
 
int nb_genomes
 Number of genomes inserted. More...
 
int length_comp_set_colors
 
int treshold_compression
 Color compression is triggered every BFT_Root::treshold_compression genome inserted. More...
 
uint8_t compressed
 
uint8_t marked
 
Node node
 

Detailed Description

Root vertex of a BFT.

A BFT_Root contains the k-mer size as well as the number and name of the inserted genomes. Other contained structures and variables are for internal use only and must not be modified.

Field Documentation

char** BFT_Root::filenames

Inserted genome file names.

int BFT_Root::k

Size of k-mers.

int BFT_Root::nb_genomes

Number of genomes inserted.

It corresponds to the number of files stored in BFT_Root::filenames.

int BFT_Root::treshold_compression

Color compression is triggered every BFT_Root::treshold_compression genome inserted.


The documentation for this struct was generated from the following file: